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  • Jones, R. N.; Thomas, Howard (2009)
  • Rudder, Steven; Doohan, Fiona; Creevey, Christopher J; Wendt, Toni; Mullins, Ewen (2014-04-07)
    Recently it has been shown that Ensifer adhaerens can be used as a plant transformation technology, transferring genes into several plant genomes when equipped with a Ti plasmid. For this study, we have sequenced the genome ...
  • Elsik, Christine G.; Tellam, Ross L.; Worley, Kim C.; Gibbs, R. A.; Muzny, D. M.; Weinstock, G. M.; Adelson, D. L.; Eichler, E. E.; Elnitski, L.; Guigo, R.; Hamernik, D. L.; Kappes, S. M.; Lewin, H. A.; Lynn, D. J.; Nicholas, F. W.; Reymond, A.; Rijnkels, M.; Skow, L. C.; Zdobnov, E. M.; Schook, L.; Womack, J.; Alioto, T.; Antonarakis, S. E.; Astashyn, A.; Chapple, C. E.; Chen, H.-C.; Chrast, J.; Camara, F.; Ermolaeva, O.; Henrichsen, C. N.; Hlavina, W.; Kapustin, Y.; Kiryutin, B.; Kitts, P.; Kokocinski, F.; Landrum, M.; Maglott, D.; Pruitt, K.; Sapojnikov, V.; Searle, S. M.; Solovyev, V.; Souvorov, A.; Ucla, C.; Wyss, C.; Anzola, J. M.; Gerlach, D.; Elhaik, E.; Graur, D.; Reese, J. T.; Edgar, R. C.; Mcewan, J. C.; Payne, G. M.; Raison, J. M.; Junier, T.; Kriventseva, E. V.; Eyras, E.; Plass, M.; Donthu, R.; Larkin, D. M.; Reecy, J.; Yang, M. Q.; Chen, L.; Cheng, Z.; Chitko-mckown, C. G.; Liu, G. E.; Matukumalli, L. K.; Song, J.; Zhu, B.; Bradley, D. G.; Brinkman, F. S.l.; Lau, L. P.l.; Whiteside, M. D.; Walker, A.; Wheeler, T. T.; Casey, T.; German, J. B.; Lemay, D. G.; Maqbool, N. J.; Molenaar, A. J.; Seo, S.; Stothard, P.; Baldwin, C. L.; Baxter, R.; Brinkmeyer-Langford, C. L.; Brown, W. C.; Childers, C. P.; Connelley, T.; Ellis, S. A.; Fritz, K.; Glass, E. J.; Herzig, C. T. A.; Iivanainen, A.; Lahmers, K. K.; Bennett, A. K.; Dickens, C. M.; Gilbert, J. G. R.; Hagen, D. E.; Salih, H.; Aerts, J.; Caetano, A. R.; Dalrymple, B.; Garcia, J. F.; Gill, C. A.; Hiendleder, S. G.; Memili, E.; Spurlock, D.; Williams, J. L.; Alexander, L.; Brownstein, M. J.; Guan, L.; Holt, R. A.; Jones, S. J. M.; Marra, M. A.; Moore, R.; Moore, S. S.; Roberts, A.; Taniguchi, M.; Waterman, R. C.; Chacko, J.; Chandrabose, M. M.; Cree, A.; Dao, M. D.; Dinh, H. H.; Gabisi, R. A.; Hines, S.; Hume, J.; Jhangiani, S. N.; Joshi, V.; Kovar, C. L.; Lewis, L. R.; Liu, Y.-S.; Lopez, J.; Morgan, M. B.; Nguyen, N. B.; Okwuonu, G. O.; Ruiz, S. J.; Santibanez, J.; Wright, R. A.; Buhay, C.; Ding, Y.; Dugan-Rocha, S.; Herdandez, J.; Holder, M.; Sabo, A.; Egan, A.; Goodell, J.; Wilczek-Boney, K.; Fowler, G. R.; Hitchens, M. E.; Lozado, R. J.; Moen, C.; Steffen, D.; Warren, J. T.; Zhang, J.; Chiu, R.; Schein, J. E.; Durbin, K. J.; Havlak, P.; Jiang, H.; Liu, Y.; Qin, X.; Ren, Y.; Shen, Y.; Song, H.; Bell, S. N.; Davis, C.; Johnson, A. J.; Lee, S.; Nazareth, L. V.; Patel, B. M.; Pu, L.-l.; Vattathil, S.; Williams, R. L.; Curry, S.; Hamilton, C.; Sodergren, E.; Wheeler, D. A.; Barris, W.; Bennett, G. L.; Eggen, A.; Green, R. D.; Harhay, G. P.; Hobbs, M.; Jann, O.; Keele, J. W.; Kent, M. P.; Lien, S.; Mckay, S. D.; Mcwilliam, S.; Ratnakumar, A.; Schnabel, R. D.; Smith, T.; Snelling, W. M.; Sonstegard, T. S.; Stone, R. T.; Sugimoto, Y.; Takasuga, A.; Taylor, J. F.; Van Tassell, C. P.; Macneil, M. D.; Abatepaulo, A. R.r.; Abbey, C. A.; Ahola, V.; Almeida, I. G.; Amadio, A. F.; Anatriello, E.; Bahadue, S. M.; Biase, F. H.; Boldt, C. R.; Carroll, J. A.; Carvalho, W. A.; Cervelatti, E. P.; Chacko, E.; Chapin, J. E.; Cheng, Y.; Choi, J.; Colley, A. J.; De Campos, T. A.; De Donato, M.; Santos, I. K. F. D. M.; De Oliveira, C. J. F.; Deobald, H.; Devinoy, E.; Donohue, K. E.; Dovc, P.; Eberlein, A.; Fitzsimmons, C. J.; Franzin, A. M.; Garcia, G. R.; Genini, S.; Gladney, C. J.; Grant, J. R.; Greaser, M. L.; Green, J. A.; Hadsell, D. L.; Hakimov, H. A.; Halgren, R.; Harrow, J. L.; Hart, E. A.; Hastings, N.; Hernandez, M.; Hu, Z.-l.; Ingham, A.; Iso-Touru, T.; Jamis, C.; Jensen, K.; Kapetis, D.; Kerr, T.; Khalil, S. S.; Khatib, H.; Kolbehdari, D.; Kumar, C. G.; Kumar, D.; Leach, R.; Lee, J. C-M; Li, C.; Logan, K. M.; Malinverni, R.; Marques, E.; Martin, W. F.; Martins, N. F.; Maruyama, S. R.; Mazza, R.; Mclean, K. L.; Medrano, J. F.; Moreno, B. T.; More, D. D.; Muntean, C. T.; Nandakumar, H. P.; Nogueira, M. F. G.; Olsaker, I.; Pant, S. D.; Panzitta, F.; Pastor, R. C. P.; Poli, M. A.; Poslusny, N.; Rachagani, S.; Ranganathan, S.; Razpet, A.; Riggs, P. K.; Rincon, G.; Rodriguez-Osorio, N.; Rodriguez-Zas, S. L.; Romero, N. E.; Rosenwald, A.; Sando, L.; Schmutz, S. M.; Shen, L.; Sherman, L.; Southey, B. R.; Lutzow, Y. S.; Sweedler, J. V.; Tammen, I.; Telugu, B. P. V.l.; Urbanski, J. M.; Utsunomiya, Y. T.; Verschoor, C. P.; Waardenberg, A. J.; Wang, Z.; Ward, R.; Weikard, R.; Welsh, T. H.; White, S. N.; Wilming, L. G.; Wunderlich, K. R.; Yang, J.; Zhao, F.-Q. (2009-04-24)
    To understand the biology and evolution of ruminants, the cattle genome was sequenced to about sevenfold coverage. The cattle genome contains a minimum of 22,000 genes, with a core set of 14,345 orthologs shared among seven ...
  • Elsik, Christine G.; Tellam, Ross L.; Worley, Kim C.; Gibbs, R. A.; Muzny, D. M.; Weinstock, G. M.; Adelson, D. L.; Eichler, E. E.; Elnitski, L.; Guigo, R.; Hamernik, D. L.; Kappes, S. M.; Lewin, H. A.; Lynn, D. J.; Nicholas, F. W.; Reymond, A.; Rijnkels, M.; Skow, L. C.; Zdobnov, E. M.; Schook, L.; Womack, J.; Alioto, T.; Antonarakis, S. E.; Astashyn, A.; Chapple, C. E.; Chen, H.-C.; Chrast, J.; Camara, F.; Ermolaeva, O.; Henrichsen, C. N.; Hlavina, W.; Kapustin, Y.; Kiryutin, B.; Kitts, P.; Kokocinski, F.; Landrum, M.; Maglott, D.; Pruitt, K.; Sapojnikov, V.; Searle, S. M.; Solovyev, V.; Souvorov, A.; Ucla, C.; Wyss, C.; Anzola, J. M.; Gerlach, D.; Elhaik, E.; Graur, D.; Reese, J. T.; Edgar, R. C.; Mcewan, J. C.; Payne, G. M.; Raison, J. M.; Junier, T.; Kriventseva, E. V.; Eyras, E.; Plass, M.; Donthu, R.; Larkin, D. M.; Reecy, J.; Yang, M. Q.; Chen, L.; Cheng, Z.; Chitko-mckown, C. G.; Liu, G. E.; Matukumalli, L. K.; Song, J.; Zhu, B.; Bradley, D. G.; Brinkman, F. S.l.; Lau, L. P.l.; Whiteside, M. D.; Walker, A.; Wheeler, T. T.; Casey, T.; German, J. B.; Lemay, D. G.; Maqbool, N. J.; Molenaar, A. J.; Seo, S.; Stothard, P.; Baldwin, C. L.; Baxter, R.; Brinkmeyer-Langford, C. L.; Brown, W. C.; Childers, C. P.; Connelley, T.; Ellis, S. A.; Fritz, K.; Glass, E. J.; Herzig, C. T. A.; Iivanainen, A.; Lahmers, K. K.; Bennett, A. K.; Dickens, C. M.; Gilbert, J. G. R.; Hagen, D. E.; Salih, H.; Aerts, J.; Caetano, A. R.; Dalrymple, B.; Garcia, J. F.; Gill, C. A.; Hiendleder, S. G.; Memili, E.; Spurlock, D.; Williams, J. L.; Alexander, L.; Brownstein, M. J.; Guan, L.; Holt, R. A.; Jones, S. J. M.; Marra, M. A.; Moore, R.; Moore, S. S.; Roberts, A.; Taniguchi, M.; Waterman, R. C.; Chacko, J.; Chandrabose, M. M.; Cree, A.; Dao, M. D.; Dinh, H. H.; Gabisi, R. A.; Hines, S.; Hume, J.; Jhangiani, S. N.; Joshi, V.; Kovar, C. L.; Lewis, L. R.; Liu, Y.-S.; Lopez, J.; Morgan, M. B.; Nguyen, N. B.; Okwuonu, G. O.; Ruiz, S. J.; Santibanez, J.; Wright, R. A.; Buhay, C.; Ding, Y.; Dugan-Rocha, S.; Herdandez, J.; Holder, M.; Sabo, A.; Egan, A.; Goodell, J.; Wilczek-Boney, K.; Fowler, G. R.; Hitchens, M. E.; Lozado, R. J.; Moen, C.; Steffen, D.; Warren, J. T.; Zhang, J.; Chiu, R.; Schein, J. E.; Durbin, K. J.; Havlak, P.; Jiang, H.; Liu, Y.; Qin, X.; Ren, Y.; Shen, Y.; Song, H.; Bell, S. N.; Davis, C.; Johnson, A. J.; Lee, S.; Nazareth, L. V.; Patel, B. M.; Pu, L.-l.; Vattathil, S.; Williams, R. L.; Curry, S.; Hamilton, C.; Sodergren, E.; Wheeler, D. A.; Barris, W.; Bennett, G. L.; Eggen, A.; Green, R. D.; Harhay, G. P.; Hobbs, M.; Jann, O.; Keele, J. W.; Kent, M. P.; Lien, S.; Mckay, S. D.; Mcwilliam, S.; Ratnakumar, A.; Schnabel, R. D.; Smith, T.; Snelling, W. M.; Sonstegard, T. S.; Stone, R. T.; Sugimoto, Y.; Takasuga, A.; Taylor, J. F.; Van Tassell, C. P.; Macneil, M. D.; Abatepaulo, A. R.r.; Abbey, C. A.; Ahola, V.; Almeida, I. G.; Amadio, A. F.; Anatriello, E.; Bahadue, S. M.; Biase, F. H.; Boldt, C. R.; Carroll, J. A.; Carvalho, W. A.; Cervelatti, E. P.; Chacko, E.; Chapin, J. E.; Cheng, Y.; Choi, J.; Colley, A. J.; De Campos, T. A.; De Donato, M.; Santos, I. K. F. D. M.; De Oliveira, C. J. F.; Deobald, H.; Devinoy, E.; Donohue, K. E.; Dovc, P.; Eberlein, A.; Fitzsimmons, C. J.; Franzin, A. M.; Garcia, G. R.; Genini, S.; Gladney, C. J.; Grant, J. R.; Greaser, M. L.; Green, J. A.; Hadsell, D. L.; Hakimov, H. A.; Halgren, R.; Harrow, J. L.; Hart, E. A.; Hastings, N.; Hernandez, M.; Hu, Z.-l.; Ingham, A.; Iso-Touru, T.; Jamis, C.; Jensen, K.; Kapetis, D.; Kerr, T.; Khalil, S. S.; Khatib, H.; Kolbehdari, D.; Kumar, C. G.; Kumar, D.; Leach, R.; Lee, J. C-M; Li, C.; Logan, K. M.; Malinverni, R.; Marques, E.; Martin, W. F.; Martins, N. F.; Maruyama, S. R.; Mazza, R.; Mclean, K. L.; Medrano, J. F.; Moreno, B. T.; More, D. D.; Muntean, C. T.; Nandakumar, H. P.; Nogueira, M. F. G.; Olsaker, I.; Pant, S. D.; Panzitta, F.; Pastor, R. C. P.; Poli, M. A.; Poslusny, N.; Rachagani, S.; Ranganathan, S.; Razpet, A.; Riggs, P. K.; Rincon, G.; Rodriguez-Osorio, N.; Rodriguez-Zas, S. L.; Romero, N. E.; Rosenwald, A.; Sando, L.; Schmutz, S. M.; Shen, L.; Sherman, L.; Southey, B. R.; Lutzow, Y. S.; Sweedler, J. V.; Tammen, I.; Telugu, B. P. V.l.; Urbanski, J. M.; Utsunomiya, Y. T.; Verschoor, C. P.; Waardenberg, A. J.; Wang, Z.; Ward, R.; Weikard, R.; Welsh, T. H.; White, S. N.; Wilming, L. G.; Wunderlich, K. R.; Yang, J.; Zhao, F.-Q. (2009-04-24)
    To understand the biology and evolution of ruminants, the cattle genome was sequenced to about sevenfold coverage. The cattle genome contains a minimum of 22,000 genes, with a core set of 14,345 orthologs shared among seven ...
  • Young, M.; Artsatbanov, Vladislav; Beller, Harry R.; Chandra, Govind; Chater, Keith F.; Dover, Lynn G.; Goh, Ee-Been; Kahan, Tamar; Kaprelyants, Arseny S.; Kyrpides, Nikos; Lapidus, Alla; Lowry, Stephen R.; Lykidis, Athanasios; Mahillon, Jacques; Markowitz, Victor; Mavromatis, Konstantinos; Mukamolova, Galina V.; Oren, Aharon; Rokem, J. Stefan; Smith, Margaret C. M.; Young, D. I.; Greenblatt, Charles L. (2010-02-01)
    Micrococcus luteus (NCTC2665, 'Fleming strain') has one of the smallest genomes of free-living actinobacteria sequenced to date, comprising a single circular chromosome of 2,501,097 bp (G+C content, 73%) predicted to encode ...
  • Young, M.; Artsatbanov, Vladislav; Beller, Harry R.; Chandra, Govind; Chater, Keith F.; Dover, Lynn G.; Goh, Ee-Been; Kahan, Tamar; Kaprelyants, Arseny S.; Kyrpides, Nikos; Lapidus, Alla; Lowry, Stephen R.; Lykidis, Athanasios; Mahillon, Jacques; Markowitz, Victor; Mavromatis, Konstantinos; Mukamolova, Galina V.; Oren, Aharon; Rokem, J. Stefan; Smith, Margaret C. M.; Young, D. I.; Greenblatt, Charles L. (2010-02-01)
    Micrococcus luteus (NCTC2665, 'Fleming strain') has one of the smallest genomes of free-living actinobacteria sequenced to date, comprising a single circular chromosome of 2,501,097 bp (G+C content, 73%) predicted to encode ...
  • Swain, Martin Thomas (2014-04-25)
    Tsetse flies are the sole vectors of human African trypanosomiasis throughout sub-Saharan Africa. Both sexes of adult tsetse feed exclusively on blood and contribute to disease transmission. Notable differences between ...
  • Swain, Martin Thomas (2014-04-25)
    Tsetse flies are the sole vectors of human African trypanosomiasis throughout sub-Saharan Africa. Both sexes of adult tsetse feed exclusively on blood and contribute to disease transmission. Notable differences between ...
  • Fang, Xiaodong; Nevo, Eviatar; Han, Lijuan; Levanon, Erez Y.; Zhao, Jing; Avivi, Aaron; Larkin, Denis; Jiang, Xuanting; Feranchuk, Sergey; Zhu, Yabing; Fishman, Alla; Feng, Yue; Sher, Noa; Xiong, Zhiqiang; Hankeln, Thomas; Huang, Zhiyong; Gorbunova, Vera; Zhang, Lu; Zhao, Wei; Wildman, Derek E.; Xiong, Yingqi; Gudkov, Andrei; Zheng, Qiumei; Rechavi, Gideon; Liu, Sanyang; Bazak, Lily; Chen, Jie; Knisbacher, Binyamin A.; Lu, Yao; Shams, Imad; Gajda, Krzysztof Piotr; Farré-Belmonte, Marta; Kim, Jaebum; Lewin, Harris A.; Ma, Jian; Band, Mark; Bicker, Anne; Kranz, Angela; Mattheus, Tobias; Schmidt, Hanno; Seluanov, Andrei; Azpurua, Jorge; Mcgowen, Michael R.; Ben Jacob, Eshel; Li, Kexin; Peng, Shaoliang; Zhu, Xiaoqian; Liao, Xiangke; Li, Shuaicheng; Krogh, Anders; Zhou, Xin; Brodsky, Leonid; Wang, Jun (2014-06-03)
  • Davey, Hazel M.; Cross, Emma Julie Marie; Davey, Christopher L.; Gkargkas, Konstantinos; Delneri, Daniela; Hoyle, David C.; Oliver, Stephen G.; Kell, Douglas B.; Griffith, Gareth W. (2012-05-01)
    Although typically cosseted in the laboratory with constant temperatures and plentiful nutrients, microbes are frequently exposed to much more stressful conditions in their natural environments where survival and competitive ...
  • Davey, Hazel M.; Cross, Emma Julie Marie; Davey, Christopher L.; Gkargkas, Konstantinos; Delneri, Daniela; Hoyle, David C.; Oliver, Stephen G.; Kell, Douglas B.; Griffith, Gareth W. (2012-05-01)
    Although typically cosseted in the laboratory with constant temperatures and plentiful nutrients, microbes are frequently exposed to much more stressful conditions in their natural environments where survival and competitive ...
  • Whitworth, David E (2015)
    BACKGROUND: Two-component systems (TCSs) are abundant prokaryotic signaling pathways, whose evolution is of particular importance because of their role in bacterial pathogenicity. Comparative genomics can provide important ...
  • Slavov, Gancho T; Nipper, Rick; Robson, Paul; Farrar, Kerrie; Allison, Gordon G; Bosch, Maurice; Clifton-Brown, John C; Donnison, Iain S; Jensen, Elaine (2014-02-03)
    Increasing demands for food and energy require a step change in the effectiveness, speed and flexibility of crop breeding. Therefore, the aim of this study was to assess the potential of genome-wide association studies ...
  • Slavov, Gancho Trifonu; Nipper, Rick; Robson, Paul Russell; Farrar, Kerrie; Allison, Gordon Graham; Bosch, Maurice; Clifton-Brown, John Cedric; Donnison, Iain Simon; Jensen, Elaine Fiona (2014-01-11)
    Increasing demands for food and energy require a step change in the effectiveness, speed and flexibility of crop breeding. The aim of this study was therefore to assess the potential of genome-wide association studies ...
  • Slavov, Gancho Trifonu; Nipper, Rick; Robson, Paul Russell; Farrar, Kerrie; Allison, Gordon Graham; Bosch, Maurice; Clifton-Brown, John Cedric; Donnison, Iain Simon; Jensen, Elaine Fiona (2014-01-11)
    Increasing demands for food and energy require a step change in the effectiveness, speed and flexibility of crop breeding. The aim of this study was therefore to assess the potential of genome-wide association studies ...
  • Montilla-Bascón, Gracia; Rispail, Nicolas; Sánchez-Martín, Javier; Rubiales, Diego; Mur, Luis A. J.; Langdon, Tim; Howarth, Catherine J; Prats, Elena (2015-03-05)
    Diseases caused by crown rust (Puccinia coronata f. sp. avenae) and powdery mildew (Blumeria graminis f. sp. avenae) are among the most important constraints for the oat crop. Breeding for resistance is one of the most ...
  • Sorek, Rotem; Zhu, Yiwen; Creevey, Christopher J; Francino, M Pilar; Bork, Peer; Rubin, Edward M (2007)
    Horizontal gene transfer, in which genetic material is transferred from the genome of one organism to that of another, has been investigated in microbial species mainly through computational sequence analyses. To address ...
  • Sorek, Rotem; Zhu, Yiwen; Creevey, Christopher J; Francino, M Pilar; Bork, Peer; Rubin, Edward M (2007-11-30)
    Horizontal gene transfer, in which genetic material is transferred from the genome of one organism to that of another, has been investigated in microbial species mainly through computational sequence analyses. To address ...
  • Lamb, David Christopher; Kelly, Steven Lewis; Kelly, Diane Elizabeth (2001)
    In the year 2001 a collection of yeast strains will be completed that are deleted in the 6000 open reading frames selected as putative genes by the initial bioinformatic analysis of the Saccharomyces cerevisiae genome. The ...
  • Lamb, David Christopher; Kelly, Steven Lewis; Kelly, Diane Elizabeth (2001)
    In the year 2001 a collection of yeast strains will be completed that are deleted in the 6000 open reading frames selected as putative genes by the initial bioinformatic analysis of the Saccharomyces cerevisiae genome. The ...