Browsing by Author "Mendes, Pedro"

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Browsing by Author "Mendes, Pedro"

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  • Pir, Pinar; Dobson, Paul D.; Smallbone, Kieran; Mendes, Pedro; King, Ross Donald; Lu, Chuan; Oliver, Stephen G.; Clare, Amanda (2010-10)
    Background: Genome-scale metabolic network models have been widely used for analysing the cellular behaviour of organisms both qualitatively and quantitatively. An iterative semi-automated procedure for model validation ...
  • Dobson, Paul D.; Smallbone, Kieran; Jameson, Daniel; Simeonidis, Evangelos; Lanthaler, Karin; Pir, Pınar; Lu, Chuan; Swainston, Neil; Dunn, Warwick B.; Fisher, Paul; Hull, Duncan; Brown, Marie; Oshota, Olusegun; Stanford, Natalie J.; Kell, Douglas B.; King, Ross Donald; Oliver, Stephen G.; Stevens, Robert D.; Mendes, Pedro (2010-10-28)
    Background. To date, several genome-scale network reconstructions have been used to describe the metabolism of the yeast Saccharomyces cerevisiae, each differing in scope and content. The recent community-driven reconstruction, ...
  • Mendes, Pedro; Kell, Douglas B. (2001)
    Summary: We describe a program for the construction of spatially distributed metabolic models, which may then be simulated using the metabolic simulator Gepasi. This is useful for the modelling of heterogeneous systems ...
  • Fiehn, Oliver; Robertson, Donald; Griffin, Julian L.; van der Werf, Mariet; Nikolau, Basil; Morrison, Norman; Sumner, Lloyd W.; Goodacre, Royston; Hardy, Nigel; Taylor, Chris F.; Fostel, Jennifer; Kristal, Bruce; Kaddurah-Daouk, Rima; Mendes, Pedro; van Ommen, B.; Lindon, John C.; Sansone, Susanna-Assunta (2007-09-01)
    In 2005, the Metabolomics Standards Initiative has been formed. An outline and general introduction is provided to inform about the history, structure, working plan and intentions of this initiative. Comments on any of the ...
  • Kristal, Bruce; Nikolau, Basil; Mendes, Pedro; Goodacre, Royston; Hardy, Nigel; Griffin, Julian L.; Fiehn, Oliver; Morrison, N.; Kaddurah-Daouk, Rima; Sumner, Lloyd W.; van der Werf, M.; Fostel, Jennifer; Taylor, Chris F.; Lindon, John C.; Sansone, Susanna-Assunta; van Ommen, B.; Robertson, Donald (2007-12-05)
    In 2005, the Metabolomics Standards Initiative has been formed. An outline and general introduction is provided to inform about the history, structure, working plan and intentions of this initiative. Comments on any of the ...
  • Bino, Raoul J.; Hall, Robert D.; Fiehn, Oliver; Kopka, Joachim; Saito, Kazuki; Draper, John H.; Nikolau, Basil J.; Mendes, Pedro; Roessner-Tunali, Ute; Beale, Michael H.; Trethewey, Richard N.; Lange, B. Markus; Wurtele, Eve Syrkin; Sumner, Lloyd W. (2004-09)
    Metabolomics is developing as an important functional genomics tool; however, there is still room for technical improvements in both the large-scale determination of metabolites from complex plant tissues and the dissemination ...
  • Jenkins, Helen Ann; Hardy, Nigel William; Beckmann, Manfred; Draper, John; Smith, Aileen Roberta; Taylor, Janet; Fiehn, Oliver; Goodacre, Royston; Bino, Raoul J.; Hall, Robert D.; Kopka, Joachim; Lane, Geoffrey A; Lange, Markus; Liu, Jang R; Mendes, Pedro; Nikolau, Basil J; Oliver, Stephen G.; Paton, Norman W.; Rhee, Sue; Roessner-Tunali, Ute; Saito, Kazuki; Smedsgaard, Jørn; Sumner, Lloyd W.; Wang, Trevor; Walsh, Sean; Wurtele, Eve Syrkin; Kell, Douglas B. (2004-12-06)
    The study of the metabolite complement of biological samples, known as metabolomics, is creating large amounts of data, and support for handling these data sets is required to facilitate meaningful analyses that will answer ...

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